STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111580728Tyrosine-protein kinase. (511 aa)    
Predicted Functional Partners:
CSK
Tyrosine-protein kinase.
  
0.716
CSK-2
Tyrosine-protein kinase.
  
0.715
grb2
Growth factor receptor-bound protein 2b.
   
0.620
pag1
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.617
ENSAOCP00000017694
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 0.609
LOC111574952
Macrophage stimulating 1 receptor a.
    
0.597
met
MET proto-oncogene, receptor tyrosine kinase.
    
0.597
mst1r
Macrophage stimulating 1 receptor b.
    
0.597
syk
Tyrosine-protein kinase.
  
0.594
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
0.593
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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