ENSAOCP00000001958 protein (Amphiprion ocellaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSAOCP00000001958

Uncharacterized protein. (190 aa)

Predicted Functional Partners:

LOC111571031

0.616

lpcat2

0.614

tmed10

0.613

klhl20

0.543

LOC111582798

0.543

cpd

0.510

fam98b

0.472

ppil3

0.465

slc46a1

0.439

gosr1

0.437

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000001958	LOC111571031	ENSAOCP00000001958	ENSAOCP00000013006	Uncharacterized protein.	Nuclear receptor subfamily 1, group H, member 3.	0.616
ENSAOCP00000001958	LOC111582798	ENSAOCP00000001958	ENSAOCP00000015047	Uncharacterized protein.	Kelch-like protein 20.	0.543
ENSAOCP00000001958	cpd	ENSAOCP00000001958	ENSAOCP00000020730	Uncharacterized protein.	Carboxypeptidase D, a.	0.510
ENSAOCP00000001958	fam98b	ENSAOCP00000001958	ENSAOCP00000013726	Uncharacterized protein.	Family with sequence similarity 98 member B.	0.472
ENSAOCP00000001958	gosr1	ENSAOCP00000001958	ENSAOCP00000012930	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.437
ENSAOCP00000001958	klhl20	ENSAOCP00000001958	ENSAOCP00000009416	Uncharacterized protein.	Kelch-like family member 20.	0.543
ENSAOCP00000001958	lpcat2	ENSAOCP00000001958	ENSAOCP00000003784	Uncharacterized protein.	Lysophosphatidylcholine acyltransferase 2.	0.614
ENSAOCP00000001958	ppil3	ENSAOCP00000001958	ENSAOCP00000014028	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.465
ENSAOCP00000001958	slc46a1	ENSAOCP00000001958	ENSAOCP00000002170	Uncharacterized protein.	Solute carrier family 46 member 1.	0.439
ENSAOCP00000001958	tmed10	ENSAOCP00000001958	ENSAOCP00000028688	Uncharacterized protein.	Transmembrane p24 trafficking protein 10.	0.613
LOC111571031	ENSAOCP00000001958	ENSAOCP00000013006	ENSAOCP00000001958	Nuclear receptor subfamily 1, group H, member 3.	Uncharacterized protein.	0.616
LOC111582798	ENSAOCP00000001958	ENSAOCP00000015047	ENSAOCP00000001958	Kelch-like protein 20.	Uncharacterized protein.	0.543
cpd	ENSAOCP00000001958	ENSAOCP00000020730	ENSAOCP00000001958	Carboxypeptidase D, a.	Uncharacterized protein.	0.510
cpd	fam98b	ENSAOCP00000020730	ENSAOCP00000013726	Carboxypeptidase D, a.	Family with sequence similarity 98 member B.	0.615
cpd	gosr1	ENSAOCP00000020730	ENSAOCP00000012930	Carboxypeptidase D, a.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.686
cpd	slc46a1	ENSAOCP00000020730	ENSAOCP00000002170	Carboxypeptidase D, a.	Solute carrier family 46 member 1.	0.796
fam98b	ENSAOCP00000001958	ENSAOCP00000013726	ENSAOCP00000001958	Family with sequence similarity 98 member B.	Uncharacterized protein.	0.472
fam98b	cpd	ENSAOCP00000013726	ENSAOCP00000020730	Family with sequence similarity 98 member B.	Carboxypeptidase D, a.	0.615
fam98b	gosr1	ENSAOCP00000013726	ENSAOCP00000012930	Family with sequence similarity 98 member B.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.619
fam98b	slc46a1	ENSAOCP00000013726	ENSAOCP00000002170	Family with sequence similarity 98 member B.	Solute carrier family 46 member 1.	0.804