STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elavl3ELAV-like protein; Belongs to the RRM elav family. (376 aa)    
Predicted Functional Partners:
LOC111571676
RRM domain-containing protein.
  
 0.604
LOC111588886
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
  
 0.587
LOC111569100
Neurogenin 1.
   
  
 0.570
LOC111578995
Transformer 2 alpha homolog.
  
 0.569
LOC111566142
Melanocyte inducing transcription factor a.
      
 0.559
ift88
Intraflagellar transport 88 homolog.
      
 0.559
RBM38
RNA binding motif protein 38.
  
   
 0.539
mgrn1
Mahogunin, ring finger 1b.
      
 0.535
LOC111574185
RRM domain-containing protein.
  
   
 0.533
LOC111565003
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
  
 0.531
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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