Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
elavl3ELAV-like protein; Belongs to the RRM elav family. (376 aa)    
Predicted Functional Partners:
LOC111588886
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
  
 0.769
LOC111574830
KN motif and ankyrin repeat domains 2.
   
  
 0.733
LOC111566142
Melanocyte inducing transcription factor a.
      
 0.731
LOC111574847
Dedicator of cytokinesis 6; Belongs to the DOCK family.
      
 0.730
LOC111569100
Neurogenin 1.
   
  
 0.724
mgrn1
Mahogunin, ring finger 1b.
      
 0.722
ift88
Intraflagellar transport 88 homolog.
      
 0.715
nprl3
NPR3-like, GATOR1 complex subunit.
      
 0.712
gap43
Growth associated protein 43.
   
 
 0.711
igfals
Insulin-like growth factor binding protein, acid labile subunit.
   
  
 0.709
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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