Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111562640Galectin. (346 aa)    
Predicted Functional Partners:
calcoco2
SKICH domain-containing protein.
    
 
 0.866
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
 
 0.827
LOC111570277
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
    
 
 0.655
brca1
Uncharacterized protein.
    
 
 0.619
itga3
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 
 0.604
LOC111583436
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 
 0.604
LOC111574391
Acylaminoacyl-peptide hydrolase.
    
   0.585
lyrm9
LYR motif containing 9; Belongs to the complex I LYR family.
      
 0.549
nectin1
Nectin cell adhesion molecule 1b.
    
   0.529
fuca1
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
      
 0.489
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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