STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111571981Procollagen C-endopeptidase enhancer a. (484 aa)    
Predicted Functional Partners:
ENSAOCP00000030400
Amnion associated transmembrane protein.
   
 0.806
tll1
Metalloendopeptidase.
   
0.585
LOC111579811
Metalloendopeptidase.
   
0.585
col22a1
Collagen, type XXII, alpha 1.
    
 0.574
LOC111574952
Macrophage stimulating 1 receptor a.
    
 0.557
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.557
mst1r
Macrophage stimulating 1 receptor b.
    
 0.557
ENSAOCP00000007776
Metalloendopeptidase.
   
0.543
vhl
Von Hippel-Lindau tumor suppressor.
      
 0.510
paqr5
Progestin and adipoQ receptor family member Va.
   
  
 0.457
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.