STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111571981Procollagen C-endopeptidase enhancer a. (484 aa)    
Predicted Functional Partners:
ENSAOCP00000030400
Amnion associated transmembrane protein.
   
 0.745
tll1
Metalloendopeptidase.
   
 0.727
LOC111579811
Metalloendopeptidase.
   
 0.727
paqr5
Progestin and adipoQ receptor family member Va.
      
 0.649
col22a1
Collagen, type XXII, alpha 1.
    
 0.648
ENSAOCP00000007776
Metalloendopeptidase.
   
 0.636
vhl
Von Hippel-Lindau tumor suppressor.
      
 0.561
smg5
SMG5 nonsense mediated mRNA decay factor.
      
 0.547
LOC111585402
Alpha-2-HS-glycoprotein 2.
      
 0.516
LOC111574952
Macrophage stimulating 1 receptor a.
    
 0.469
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.