LOC111582573 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111582573

Zgc:77112. (295 aa)

Predicted Functional Partners:

gys2

0.875

gys1

0.875

phkg1

0.664

phkg2

0.664

phkb

0.658

LOC111567333

0.658

LOC111566088

0.650

CALML6

0.650

calml4

0.650

depdc5

0.537

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALML6	LOC111566088	ENSAOCP00000006592	ENSAOCP00000002457	Calmodulin like 6.	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.917
CALML6	LOC111567333	ENSAOCP00000006592	ENSAOCP00000032063	Calmodulin like 6.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.930
CALML6	LOC111582573	ENSAOCP00000006592	ENSAOCP00000001978	Calmodulin like 6.	Zgc:77112.	0.650
CALML6	calml4	ENSAOCP00000006592	ENSAOCP00000022080	Calmodulin like 6.	Calmodulin-like 4a.	0.900
CALML6	phkb	ENSAOCP00000006592	ENSAOCP00000011727	Calmodulin like 6.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.930
CALML6	phkg1	ENSAOCP00000006592	ENSAOCP00000011346	Calmodulin like 6.	Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.	0.939
CALML6	phkg2	ENSAOCP00000006592	ENSAOCP00000024965	Calmodulin like 6.	Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.	0.939
LOC111566088	CALML6	ENSAOCP00000002457	ENSAOCP00000006592	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	Calmodulin like 6.	0.917
LOC111566088	LOC111567333	ENSAOCP00000002457	ENSAOCP00000032063	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.956
LOC111566088	LOC111582573	ENSAOCP00000002457	ENSAOCP00000001978	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	Zgc:77112.	0.650
LOC111566088	calml4	ENSAOCP00000002457	ENSAOCP00000022080	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	Calmodulin-like 4a.	0.906
LOC111566088	phkb	ENSAOCP00000002457	ENSAOCP00000011727	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.967
LOC111566088	phkg1	ENSAOCP00000002457	ENSAOCP00000011346	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.	0.961
LOC111566088	phkg2	ENSAOCP00000002457	ENSAOCP00000024965	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.	0.961
LOC111567333	CALML6	ENSAOCP00000032063	ENSAOCP00000006592	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Calmodulin like 6.	0.930
LOC111567333	LOC111566088	ENSAOCP00000032063	ENSAOCP00000002457	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.956
LOC111567333	LOC111582573	ENSAOCP00000032063	ENSAOCP00000001978	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Zgc:77112.	0.658
LOC111567333	calml4	ENSAOCP00000032063	ENSAOCP00000022080	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Calmodulin-like 4a.	0.930
LOC111567333	phkb	ENSAOCP00000032063	ENSAOCP00000011727	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.	0.972
LOC111567333	phkg1	ENSAOCP00000032063	ENSAOCP00000011346	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.	0.982