Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
rab11fip2RAB11 family interacting protein 2 (class I). (471 aa)    
Predicted Functional Partners:
LOC111576370
EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.937
LOC111566871
Uncharacterized protein.
    
 0.879
LOC111587314
RAB11B, member RAS oncogene family, b.
    
 0.879
LOC111568000
RAB11a, member RAS oncogene family.
    
 0.879
LOC111578035
RAB11a, member RAS oncogene family, like.
    
 0.879
LOC111563469
RAB11B, member RAS oncogene family, a.
    
 0.879
ENSAOCP00000000470
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.636
ENSAOCP00000000487
Dilute domain-containing protein.
   
 0.636
myo5a
Myosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.636
ENSAOCP00000013335
Methyl-CpG binding domain protein 3b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.636
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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