STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc46a2Solute carrier family 46 member 2. (444 aa)    
Predicted Functional Partners:
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.705
elac1
ElaC ribonuclease Z 1.
      
 0.703
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.690
ENSAOCP00000024201
Sushi domain containing 1.
    
 
 0.689
tdrd3
Tudor domain containing 3.
      
 0.686
OTOR
Otoraplin.
      
 0.613
slc19a1
Solute carrier family 19 member 1.
      
 0.613
LOC111570330
Solute carrier family 29 member 4.
      
 0.591
glipr2
GLI pathogenesis-related 2, like; Belongs to the CRISP family.
      
 0.584
wdr76
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
      
 0.515
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.