Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574845Si:ch211-66e2.5. (304 aa)    
Predicted Functional Partners:
afdn
Afadin, adherens junction formation factor a.
    
 0.666
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.486
LOC111575429
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.486
ENSAOCP00000006910
Zgc:113337.
  
     0.483
ENSAOCP00000027718
Uncharacterized protein.
  
     0.472
ENSAOCP00000012419
Uncharacterized protein.
  
     0.456
LOC111576697
Bloodthirsty-related gene family, member 12.
  
     0.452
mst1r
Macrophage stimulating 1 receptor b.
  
 0.431
LOC111588529
Uncharacterized protein.
  
     0.425
LOC111565213
Melanoma cell adhesion molecule a.
  
 
 0.409
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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