Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
brms1BRMS1 transcriptional repressor and anoikis regulator. (279 aa)    
Predicted Functional Partners:
sap30l
Sap30-like.
   
 0.998
LOC111588426
Uncharacterized protein.
    
   0.955
LOC111588145
SIN3-HDAC complex associated factor.
    
 
 0.932
SINHCAF
SIN3-HDAC complex associated factor.
    
 
 0.932
ing1
Inhibitor of growth protein.
    
 
 0.909
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.903
arid4a
AT rich interactive domain 4A (RBP1-like).
   
 0.903
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.865
LOC111577897
WD_REPEATS_REGION domain-containing protein.
    
 0.865
LOC111572897
WD_REPEATS_REGION domain-containing protein.
    
 0.865
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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