Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111580065Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (333 aa)    
Predicted Functional Partners:
LOC111588521
Hydroxysteroid (20-beta) dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.936
LOC111563582
Hydroxysteroid (17-beta) dehydrogenase 7.
     
 0.931
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
     
 0.931
LOC111571005
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
0.924
LOC111567878
Hydroxysteroid (17-beta) dehydrogenase 12a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
0.924
hsd17b1
Hydroxysteroid (17-beta) dehydrogenase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
0.918
hsd11b1l
Hydroxysteroid (11-beta) dehydrogenase 1-like a.
  
  
 
0.906
LOC111567499
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.901
dhrs11
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.901
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
     
0.900
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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