STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000002136Atypical chemokine receptor 4a; Belongs to the G-protein coupled receptor 1 family. (390 aa)    
Predicted Functional Partners:
LOC111570623
Chemokine (C-C motif) ligand 25b.
    
 0.980
LOC111565603
SCY domain-containing protein.
   
 0.973
LOC111575495
Chemokine (C-C motif) ligand 25a.
     
  0.909
LOC111581397
Atypical chemokine receptor 4b; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.902
LOC111565606
SCY domain-containing protein.
     
  0.900
LOC111585760
C-C motif chemokine.
  
 0.514
LOC111563069
C-X-C motif chemokine.
    
 0.494
LOC111563068
SCY domain-containing protein.
    
 0.494
LOC111577430
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
    
 0.427
LOC111569928
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.427
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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