Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc46a1Solute carrier family 46 member 1. (494 aa)    
Predicted Functional Partners:
mfrp
Membrane frizzled-related protein.
   
 
 0.861
dhfr
Dihydrofolate reductase.
      
 0.847
LOC111574965
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
      
 0.841
fam98b
Family with sequence similarity 98 member B.
      
 0.804
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
      
 0.799
cpd
Carboxypeptidase D, a.
      
 0.796
LOC111572459
C1q and TNF related 9.
   
   0.785
LOC111585162
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
      
 0.765
pde3b
Phosphodiesterase.
      
 0.747
slc19a1
Solute carrier family 19 member 1.
      
 0.732
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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