Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585828SH2 domain containing 1A duplicate b. (125 aa)    
Predicted Functional Partners:
cd3g
Uncharacterized protein.
   
  
 0.858
cd247
Uncharacterized protein.
   
 
 0.732
frk
Tyrosine-protein kinase.
   
 0.728
SRMS
Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.723
LOC111580939
Uncharacterized protein.
   
 0.723
FYN
Tyrosine-protein kinase.
   
 0.663
LOC111573260
Tyrosine-protein kinase.
   
 0.663
LOC111567751
Tyrosine-protein kinase.
   
 0.663
LOC111567104
Tyrosine-protein kinase.
   
 0.663
ENSAOCP00000020813
Si:ch211-130m23.5.
   
  
 0.662
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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