STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwc2Von Willebrand factor C domain containing 2. (311 aa)    
Predicted Functional Partners:
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.540
prr35
Si:ch211-248l17.3.
      
 0.449
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.434
TMEM43
Uncharacterized protein.
      
 0.432
pkdcc
Protein kinase domain containing, cytoplasmic b.
     
 0.430
LOC111571265
Neuritin 1a.
      
 0.429
rrp36
Ribosomal RNA processing 36.
      
 0.424
xpc
Xeroderma pigmentosum, complementation group C.
      
 0.422
LOC111587712
Uncharacterized protein.
      
 0.414
klhdc8b
Kelch domain containing 8B.
      
 0.408
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.