Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
usp46Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family. (364 aa)    
Predicted Functional Partners:
wdr20
WD repeat domain 20a.
   
 0.885
LOC111569972
DM1 locus, WD repeat containing.
   
 0.885
ENSAOCP00000024788
Uncharacterized protein.
   
 0.812
LOC111573801
WD repeat domain 20b.
   
 0.812
rps27a
Ribosomal protein S27a.
    
  0.767
ar
Androgen receptor.
    
 0.746
LOC111568069
Uncharacterized protein.
    
 0.746
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.713
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.696
LOC111566873
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.696
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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