STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp46Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family. (364 aa)    
Predicted Functional Partners:
wdr20
WD repeat domain 20a.
   
 0.846
LOC111569972
DM1 locus, WD repeat containing.
   
 0.846
ENSAOCP00000024788
Uncharacterized protein.
   
 0.801
LOC111573801
WD repeat domain 20b.
   
 0.801
rps27a
Ribosomal protein S27a.
    
 0.764
fancd2
FA complementation group D2.
    
 0.755
fanci
FA complementation group I.
   
 0.705
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.693
LOC111566873
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.693
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.659
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (40%) [HD]