STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d2bTBC1 domain family, member 2B. (976 aa)    
Predicted Functional Partners:
LOC111565049
Im:7152348.
    
 
 0.589
LOC111588772
RAB7a, member RAS oncogene family.
    
 0.586
LOC111566639
Uncharacterized protein.
    
 0.586
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
    
  0.561
ENSAOCP00000030355
Uncharacterized protein.
    
  0.561
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
      
 0.517
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.485
cfap126
Uncharacterized protein.
   
   0.478
pacrg
PARK2 co-regulated.
   
   0.466
spag8
Sperm associated antigen 8.
    
   0.465
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.