Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d2bTBC1 domain family, member 2B. (976 aa)    
Predicted Functional Partners:
fam124a
Uncharacterized protein.
      
 0.723
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
      
 0.684
LOC111588772
RAB7a, member RAS oncogene family.
    
 0.658
LOC111566639
Uncharacterized protein.
    
 0.658
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
    
   0.597
ENSAOCP00000030355
Uncharacterized protein.
    
   0.597
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.592
st6galnac6
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.549
mon1a
MON1 secretory trafficking family member A.
      
 0.544
cfap126
Uncharacterized protein.
   
   0.530
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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