Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC111580050Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (416 aa)    
Predicted Functional Partners:
LOC111574326
Gamma-glutamyltransferase 5a.
  
  
 0.572
ttf2
Transcription termination factor, RNA polymerase II.
     
  0.551
LOC111582626
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
      
 0.544
asmtl
Acetylserotonin O-methyltransferase-like.
      
 0.513
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
      
 0.511
abtb1
Ankyrin repeat and BTB (POZ) domain containing 1.
   
  
 0.490
LOC111580100
Zgc:114181.
  
  
 0.482
cndp2
Carnosine dipeptidase 2.
  
  
 0.465
pgk1
Phosphoglycerate kinase.
     
 0.461
ENSAOCP00000008513
Uncharacterized protein.
  
  
 0.457
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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