STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scgnSecretagogin, EF-hand calcium binding protein. (286 aa)    
Predicted Functional Partners:
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.666
LOC111575429
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.666
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
   
 0.553
ENSAOCP00000030355
Uncharacterized protein.
   
 0.553
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.514
dclk1
Doublecortin-like kinase 1a.
   
 0.488
LOC111563678
Doublecortin-like kinase 1b.
   
 0.488
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.437
LOC111570956
Somatostatin.
   
  
 0.428
pacrg
PARK2 co-regulated.
    
 
 0.422
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.