Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111564360Tantalus domain-containing protein. (662 aa)    
Predicted Functional Partners:
sfxn4
Sideroflexin 4.
      
 0.594
ENSAOCP00000012543
Uncharacterized protein.
     
 0.509
LOC111565778
Trafficking protein particle complex 10.
     
 0.509
Sfi1
Uncharacterized protein.
      
 0.462
gopc
Golgi-associated PDZ and coiled-coil motif containing.
    
 0.434
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.421
akap11
A kinase (PRKA) anchor protein 11.
      
 0.420
LOC111579458
Uncharacterized protein.
  
  0.411
rbm26
RNA binding motif protein 26.
    
 
 0.401
rbm27
RNA binding motif protein 27.
    
 
 0.401
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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