STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
poc5POC5 centriolar protein homolog (Chlamydomonas). (570 aa)    
Predicted Functional Partners:
cetn3
Centrin 3.
    
 
 0.894
LOC111570067
Centrin 4.
    
 
 0.645
LOC111565572
Centrin, EF-hand protein, 2.
    
 
 0.645
wdr53
WD repeat domain 53.
   
    0.624
fam161a
FAM161 centrosomal protein A.
    
 
 0.616
iars2
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.578
ENSAOCP00000018043
Uncharacterized protein.
   
  
 0.578
spice1
Spindle and centriole associated protein 1.
      
 0.576
Sfi1
Uncharacterized protein.
      
 0.575
cep135
Centrosomal protein 135.
      
 0.573
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.