Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
poc5POC5 centriolar protein homolog (Chlamydomonas). (570 aa)    
Predicted Functional Partners:
cetn3
Centrin 3.
    
 
 0.991
LOC111570067
Centrin 4.
    
 
 0.918
LOC111565572
Centrin, EF-hand protein, 2.
    
 
 0.918
ENSAOCP00000000845
WD_REPEATS_REGION domain-containing protein.
    
 
 0.778
ENSAOCP00000018043
Uncharacterized protein.
   
 
 0.756
spice1
Spindle and centriole associated protein 1.
   
  
 0.753
iars2
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.713
cep76
Centrosomal protein 76.
      
 0.705
cep89
Centrosomal protein 89.
      
 0.705
sass6
SAS-6 centriolar assembly protein.
   
  
 0.702
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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