Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111565517Inhibitor of DNA binding 4. (141 aa)    
Predicted Functional Partners:
LOC111587431
Myogenin.
    
 
 0.833
olig1
Oligodendrocyte transcription factor 1.
    
 
 0.614
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
      
 0.613
cep76
Centrosomal protein 76.
      
 0.613
ASCL4
Achaete-scute family bHLH transcription factor 4.
    
 0.613
ASCL5
Achaete-scute family bHLH transcription factor 5.
    
 0.613
ptpn2
Tyrosine-protein phosphatase non-receptor type.
      
 0.605
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
      
 0.605
ENSAOCP00000002211
Uncharacterized protein.
    
 0.599
LOC111578418
Transcription factor 12.
    
 
 0.566
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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