reck protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

reck

Reversion-inducing-cysteine-rich protein with kazal motifs. (901 aa)

Predicted Functional Partners:

tspan12

0.775

brca2

0.747

ENSAOCP00000004043

0.635

WNT7A

0.635

LOC111577764

0.624

Wnt7b

0.624

brca1

0.617

LOC111563741

0.615

LOC111588009

0.615

adgra2

0.615

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000004043	adgra2	ENSAOCP00000004043	ENSAOCP00000028932	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	0.476
ENSAOCP00000004043	reck	ENSAOCP00000004043	ENSAOCP00000002287	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Reversion-inducing-cysteine-rich protein with kazal motifs.	0.635
LOC111563741	brca1	ENSAOCP00000014318	ENSAOCP00000000481	PR domain containing 2, with ZNF domain a.	Uncharacterized protein.	0.554
LOC111563741	brca2	ENSAOCP00000014318	ENSAOCP00000005723	PR domain containing 2, with ZNF domain a.	BRCA2 DNA repair associated.	0.615
LOC111563741	reck	ENSAOCP00000014318	ENSAOCP00000002287	PR domain containing 2, with ZNF domain a.	Reversion-inducing-cysteine-rich protein with kazal motifs.	0.615
LOC111577764	adgra2	ENSAOCP00000021049	ENSAOCP00000028932	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	0.436
LOC111577764	reck	ENSAOCP00000021049	ENSAOCP00000002287	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Reversion-inducing-cysteine-rich protein with kazal motifs.	0.624
LOC111588009	brca1	ENSAOCP00000027223	ENSAOCP00000000481	PR domain containing 2, with ZNF domain b.	Uncharacterized protein.	0.554
LOC111588009	brca2	ENSAOCP00000027223	ENSAOCP00000005723	PR domain containing 2, with ZNF domain b.	BRCA2 DNA repair associated.	0.615
LOC111588009	reck	ENSAOCP00000027223	ENSAOCP00000002287	PR domain containing 2, with ZNF domain b.	Reversion-inducing-cysteine-rich protein with kazal motifs.	0.615
WNT7A	adgra2	ENSAOCP00000013998	ENSAOCP00000028932	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	0.476
WNT7A	reck	ENSAOCP00000013998	ENSAOCP00000002287	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Reversion-inducing-cysteine-rich protein with kazal motifs.	0.635
Wnt7b	adgra2	ENSAOCP00000030737	ENSAOCP00000028932	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	0.436
Wnt7b	reck	ENSAOCP00000030737	ENSAOCP00000002287	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Reversion-inducing-cysteine-rich protein with kazal motifs.	0.624
adgra2	ENSAOCP00000004043	ENSAOCP00000028932	ENSAOCP00000004043	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.476
adgra2	LOC111577764	ENSAOCP00000028932	ENSAOCP00000021049	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.436
adgra2	WNT7A	ENSAOCP00000028932	ENSAOCP00000013998	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.476
adgra2	Wnt7b	ENSAOCP00000028932	ENSAOCP00000030737	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.436
adgra2	reck	ENSAOCP00000028932	ENSAOCP00000002287	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	Reversion-inducing-cysteine-rich protein with kazal motifs.	0.615
adgra2	tspan12	ENSAOCP00000028932	ENSAOCP00000026976	Adhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family.	Tetraspanin.	0.620