Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111566099ZP domain-containing protein. (409 aa)    
Predicted Functional Partners:
LOC111566197
ZP domain-containing protein.
   
 0.774
LOC111583217
ZP domain-containing protein.
   
 0.774
LOC111582608
ZP domain-containing protein.
   
 
 0.641
LOC111567549
Growth differentiation factor 9.
   
 0.580
bmp15
Bone morphogenetic protein 15.
   
 0.451
LOC111572750
Zona pellucida glycoprotein 3b.
   
 
 0.442
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.421
dazap1
DAZ associated protein 1.
    
 
 0.415
spata4
Spermatogenesis associated 4.
    
 
 0.409
ovca2
OVCA2 serine hydrolase domain containing.
      
 0.405
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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