Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574817Thyroid hormone receptor interactor 10a. (594 aa)    
Predicted Functional Partners:
rhoq
Ras homolog family member Q.
    
 0.954
LOC111566259
Thyroid hormone receptor interactor 10b.
  
  
 
0.901
CDC42
Cell division cycle 42.
    
 0.890
LOC111573839
Uncharacterized protein.
    
 0.890
LOC111581872
WASP like actin nucleation promoting factor b.
   
 0.778
was
Uncharacterized protein.
   
 0.778
LOC111581540
WASP like actin nucleation promoting factor a.
   
 0.778
LOC111585700
Cell division cycle 42, like.
    
 0.744
LOC111571073
Cell division control protein 42 homolog.
    
 0.744
LOC111571068
Uncharacterized protein.
    
 0.744
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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