STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1ccSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (323 aa)    
Predicted Functional Partners:
rb1
Retinoblastoma 1.
   
 0.965
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.959
LOC111586657
Retinoblastoma-like 2 (p130).
   
 0.940
LOC111562899
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
     
 0.938
ppp1r14a
Protein phosphatase 1, regulatory (inhibitor) subunit 14Ab.
     
 0.937
LOC111565883
Myosin, light chain 9a, regulatory.
   
 0.931
WDR33
WD repeat domain 33.
   
 0.931
LOC111585424
WD repeat domain 82.
   
 0.926
LOC111568125
WD_REPEATS_REGION domain-containing protein.
   
 0.926
LOC111588747
Uncharacterized protein.
   
 0.924
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.