STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585800Ets variant 5a. (511 aa)    
Predicted Functional Partners:
cop1
COP1 E3 ubiquitin ligase.
    
 
 0.799
stk40
Serine/threonine kinase 40.
    
   0.706
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
 
 0.693
Zbtb16
Zinc finger and BTB domain containing 16a.
   
  
 0.586
ENSAOCP00000014914
Mix-type homeobox gene 1.
   
  
 0.563
id2
Inhibitor of DNA binding 2a.
     
 0.507
gdnf
Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake.
      
 0.485
LOC111565517
Inhibitor of DNA binding 4.
     
 0.449
runx2
Runt-related transcription factor.
   
 0.434
LOC111562778
Runt-related transcription factor.
   
 0.434
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.