Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC111580033Protein kinase cAMP-dependent type I regulatory subunit beta. (148 aa)    
Predicted Functional Partners:
LOC111562596
Protein kinase, cAMP-dependent, regulatory, type I, beta.
 
      0.833
akap1
A kinase (PRKA) anchor protein 1b.
    
 0.800
akap10
A kinase (PRKA) anchor protein 10.
    
 0.752
LOC111579002
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.732
LOC111586379
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.732
LOC111577932
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
   
 0.732
LOC111573654
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
   
 0.732
prkx
Protein kinase X-linked; Belongs to the protein kinase superfamily.
   
 0.723
gpr161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
    
 0.691
akap11
A kinase (PRKA) anchor protein 11.
    
 
 0.650
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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