STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111579637Coagulation factor IXa. (492 aa)    
Predicted Functional Partners:
LOC111562878
Uncharacterized protein.
    
 0.749
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
  
0.738
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
   
 0.707
LOC111574952
Macrophage stimulating 1 receptor a.
    
 0.598
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.598
mst1r
Macrophage stimulating 1 receptor b.
    
 0.598
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
   
 0.586
LOC111571367
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
   
 0.586
LOC111578903
Si:ch1073-416d2.3; Belongs to the serpin family.
   
 0.579
LOC111571402
Tissue factor pathway inhibitor.
    
 0.575
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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