STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111580029Uncharacterized protein. (103 aa)    
Predicted Functional Partners:
Ermn
Uncharacterized protein.
   
  
 0.786
myrip
Myosin VIIA and Rab interacting protein.
   
  
 0.583
galc
Galactosylceramidase b.
      
 0.557
LOC111563799
Myelin protein zero-like 1 like.
      
 0.555
LOC111577637
Proteolipid protein 1b.
   
 
 0.541
LOC111565559
Proteolipid protein 1a.
   
 
 0.541
gpm6a
Glycoprotein M6Aa.
   
 
 0.541
LOC111586508
Uncharacterized protein.
   
 
 0.541
gap43
Growth associated protein 43.
      
 0.481
ENSAOCP00000002430
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.448
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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