Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000003012Uncharacterized protein. (272 aa)    
Predicted Functional Partners:
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.683
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.673
pot1
Telo_bind domain-containing protein.
    
 
 0.643
LOC111586476
Chromo domain-containing protein.
    
 
 0.640
CDYL2
Chromodomain Y like 2.
    
 
 0.640
LOC111568781
Chromodomain protein, Y-like.
    
 
 0.640
tert
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.605
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.598
cinp
Cyclin-dependent kinase 2 interacting protein.
   
 0.598
c8b
Complement component 8, beta polypeptide.
   
 0.577
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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