Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lypla1Lysophospholipase 1. (234 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
   
 0.953
pla2g15
Phospholipase A2, group XV.
     
 0.930
ENSAOCP00000006374
Si:dkey-177p2.18.
     
 0.911
LOC111571376
Lecithin-cholesterol acyltransferase.
     
 0.910
LOC111587604
Patatin-like phospholipase domain containing 7b.
  
 
 0.908
LOC111583503
Patatin-like phospholipase domain containing 6.
  
 
 0.908
LOC111582244
Uncharacterized protein.
  
 
 0.908
chaf1b
Chromatin assembly factor 1, subunit B.
    
 
 0.794
LOC111585532
Lysophosphatidylcholine acyltransferase 4.
   
 
 0.735
LOC111569997
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
      
 0.705
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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