Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111583226Carnitine palmitoyltransferase 1B (muscle); Belongs to the carnitine/choline acetyltransferase family. (787 aa)    
Predicted Functional Partners:
acacb
Acetyl-CoA carboxylase beta.
     
 0.925
cpt2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.923
acsbg1
Acyl-CoA synthetase bubblegum family member 1.
   
 
 0.721
acsl3
AMP-binding domain-containing protein.
   
 
 0.714
acsl4
Acyl-CoA synthetase long chain family member 4a.
   
 
 0.714
LOC111577308
Acyl-CoA synthetase long chain family member 3b.
   
 
 0.714
acsl1
Acyl-CoA synthetase long chain family member 1a.
   
 
 0.707
ACSL1
Acyl-CoA synthetase long chain family member 1.
   
 
 0.707
LOC111563733
AMP-binding domain-containing protein.
   
 
 0.707
LOC111578646
Acyl-CoA synthetase long chain family member 2.
   
 
 0.707
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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