SLC24A2 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARVCF	LOC111572741	ENSAOCP00000005733	ENSAOCP00000014727	ARVCF delta catenin family member b.	Uncharacterized protein.	0.438
ARVCF	SLC24A2	ENSAOCP00000005733	ENSAOCP00000003229	ARVCF delta catenin family member b.	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.422
ARVCF	glis2	ENSAOCP00000005733	ENSAOCP00000022291	ARVCF delta catenin family member b.	GLIS family zinc finger 2b.	0.438
LOC111564656	LOC111573371	ENSAOCP00000030254	ENSAOCP00000027054	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.896
LOC111564656	LOC111584765	ENSAOCP00000030254	ENSAOCP00000028191	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.864
LOC111564656	SLC24A2	ENSAOCP00000030254	ENSAOCP00000003229	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.496
LOC111567971	LOC111572741	ENSAOCP00000030124	ENSAOCP00000014727	ARVCF delta catenin family member a.	Uncharacterized protein.	0.513
LOC111567971	SLC24A2	ENSAOCP00000030124	ENSAOCP00000003229	ARVCF delta catenin family member a.	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.422
LOC111567971	glis2	ENSAOCP00000030124	ENSAOCP00000022291	ARVCF delta catenin family member a.	GLIS family zinc finger 2b.	0.623
LOC111572741	ARVCF	ENSAOCP00000014727	ENSAOCP00000005733	Uncharacterized protein.	ARVCF delta catenin family member b.	0.438
LOC111572741	LOC111567971	ENSAOCP00000014727	ENSAOCP00000030124	Uncharacterized protein.	ARVCF delta catenin family member a.	0.513
LOC111572741	SLC24A2	ENSAOCP00000014727	ENSAOCP00000003229	Uncharacterized protein.	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.422
LOC111572741	hoxb9	ENSAOCP00000014727	ENSAOCP00000009167	Uncharacterized protein.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.566
LOC111573371	LOC111564656	ENSAOCP00000027054	ENSAOCP00000030254	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.	0.896
LOC111573371	LOC111584765	ENSAOCP00000027054	ENSAOCP00000028191	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.989
LOC111573371	SLC24A2	ENSAOCP00000027054	ENSAOCP00000003229	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.433
LOC111584765	LOC111564656	ENSAOCP00000028191	ENSAOCP00000030254	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.	0.864
LOC111584765	LOC111573371	ENSAOCP00000028191	ENSAOCP00000027054	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.989
LOC111584765	SLC24A2	ENSAOCP00000028191	ENSAOCP00000003229	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.419
SLC24A2	ARVCF	ENSAOCP00000003229	ENSAOCP00000005733	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	ARVCF delta catenin family member b.	0.422