STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111564293Kell metallo-endopeptidase (Kell blood group). (775 aa)    
Predicted Functional Partners:
LOC111588455
Uncharacterized protein.
     
 0.909
ENSAOCP00000028109
Uncharacterized protein.
     
 0.744
xk
XK-related protein.
     
 0.657
LOC111573934
XK-related protein.
     
 0.633
LOC111573332
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
     
 0.633
LOC111573938
NADPH oxidase 1.
     
 0.633
LOC111574642
Rh blood group, D antigen; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
  
 0.551
nox5
NADPH oxidase, EF-hand calcium binding domain 5.
     
 0.545
NOX4
NADPH oxidase 4.
     
 0.545
LOC111577711
Dual oxidase.
     
 0.545
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.