Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000003262PDE4_UCR domain-containing protein. (138 aa)    
Predicted Functional Partners:
ENSAOCP00000003279
PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family.
 
      0.690
LOC111566858
Phosphodiesterase.
 
      0.690
LOC111579002
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.573
LOC111586379
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.573
LOC111577932
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
   
 0.573
LOC111573654
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
   
 0.573
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 0.529
prkx
Protein kinase X-linked; Belongs to the protein kinase superfamily.
   
 0.525
LOC111584900
Protein phosphatase 1, regulatory (inhibitor) subunit 1B.
     
 0.473
PPP1R1B
Protein phosphatase 1 regulatory inhibitor subunit 1B.
     
 0.473
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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