Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111570702Ring finger protein 114. (223 aa)    
Predicted Functional Partners:
xaf1
XIAP associated factor 1.
    
 0.873
parp12
Poly (ADP-ribose) polymerase family, member 12a.
    
  0.863
dcaf11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.701
rnf166
Ring finger protein 166.
    
   0.670
RNF166
Ring finger protein 166.
    
   0.670
fem1b
Fem-1 homolog b (C. elegans).
   
 0.622
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 
 0.621
rnf4
Ring finger protein 4.
   
 
 0.577
dcaf5
Ddb1 and cul4 associated factor 5.
      
 0.516
crbn
Cereblon.
    
 
 0.501
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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