STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spata2Spermatogenesis associated 2. (566 aa)    
Predicted Functional Partners:
LOC111579941
Cylindromatosis (turban tumor syndrome), b.
     
 0.955
LOC111582303
Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.
     
 0.955
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
     
 0.955
LOC111585530
Uncharacterized protein.
     
 0.952
LOC111562492
Si:dkey-181m9.8.
     
  0.925
LOC111568988
Uncharacterized protein.
     
  0.925
rbck1
RanBP-type and C3HC4-type zinc finger containing 1.
     
  0.910
LOC111587713
Sharpin and rbck1 related.
     
  0.909
LOC111568702
SHANK-associated RH domain interacting protein.
     
  0.903
LOC111563659
Uncharacterized protein.
     
 
0.900
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.