Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
drg1Developmentally regulated GTP binding protein 1. (366 aa)    
Predicted Functional Partners:
zc3h15
Zinc finger CCCH-type containing 15.
   
 0.999
rwdd1
RWD domain containing 1.
   
 0.989
rwdd4
RWD domain containing 4.
   
 0.924
knop1
Lysine-rich nucleolar protein 1.
   
  
 0.912
drg2
Developmentally regulated GTP binding protein 2.
   
   0.907
lrrc41
Uncharacterized protein.
   
   0.877
ntmt1
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
   
   0.863
rpl8
Ribosomal protein L8.
   
 
 0.845
rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
   0.841
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.834
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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