STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111583214Heparan sulfate 2-O-sulfotransferase 1b. (357 aa)    
Predicted Functional Partners:
hs2st1
Heparan sulfate 2-O-sulfotransferase 1a.
  
  
 
0.900
glce
Glucuronic acid epimerase b.
   
 
 0.592
LOC111564477
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.570
LOC111586529
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.570
LOC111577251
Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.525
LOC111569954
Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.525
LOC111581185
Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.525
ENSAOCP00000030734
Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.525
LOC111567765
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.517
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.504
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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