Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
prkaa1Non-specific serine/threonine protein kinase. (573 aa)    
Predicted Functional Partners:
LOC111586174
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
   
 0.991
tsc2
TSC complex subunit 2.
    
 0.991
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
0.991
LOC111574312
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
   
 0.989
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 0.989
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.989
prkag1
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.987
LOC111570138
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.986
LOC111568751
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.986
LOC111575261
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.986
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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