Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111570696Zgc:109949. (278 aa)    
Predicted Functional Partners:
rad18
RAD18 E3 ubiquitin protein ligase.
      
 0.589
LOC111569204
Opticin.
      
 0.550
rad17
RAD17 checkpoint clamp loader component.
      
 0.506
fancl
FA complementation group L.
      
 0.492
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.436
lyz
Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family.
      
 0.417
LOC111585237
Cystatin C (amyloid angiopathy and cerebral hemorrhage); Belongs to the cystatin family.
      
 0.413
LOC111576077
Eph receptor B2a.
      
 0.408
tmprss15
Transmembrane serine protease 15; Belongs to the peptidase S1 family.
      
 0.404
LOC111566588
Transmembrane protein 59-like.
      
 0.401
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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