Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111569512Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
slc31a2
Solute carrier family 31 member 2.
      
 0.574
tnip1
TNFAIP3 interacting protein 1.
      
 0.543
acp1
LMWPc domain-containing protein.
      
 0.515
mxd4
MAX dimerization protein 4.
      
 0.511
LOC111574750
RAB33A, member RAS oncogene family.
      
 0.502
mxd3
MAX dimerization protein 3.
      
 0.476
nfya
Nuclear transcription factor Y, alpha, like.
      
 0.441
rrbp1
Ribosome binding protein 1a.
      
 0.438
nfyb
Nuclear transcription factor Y, beta a.
      
 0.415
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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