STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggcxGamma-glutamyl carboxylase. (765 aa)    
Predicted Functional Partners:
LOC111581582
Vitamin K epoxide reductase complex, subunit 1.
   
 
 0.967
LOC111578955
Flavodoxin_2 domain-containing protein.
     
 0.928
LOC111569366
NAD(P)H dehydrogenase, quinone 1.
     
 0.928
LOC111578954
Flavodoxin_2 domain-containing protein.
     
 0.928
vkorc1l1
Vitamin K epoxide reductase complex, subunit 1-like 1.
     
 0.925
pros1
Protein S.
   
 
 0.869
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.846
proc
Uncharacterized protein.
    
 0.727
LOC111585772
Proline rich Gla (G-carboxyglutamic acid) 1.
    
 
 0.597
cachd1
Cache domain containing 1.
      
 0.593
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.