Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC111569034t-SNARE coiled-coil homology domain-containing protein. (216 aa)    
Predicted Functional Partners:
vamp4
Vesicle-associated membrane protein 4.
    
 0.963
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.962
stx16
Syntaxin 16; Belongs to the syntaxin family.
   
 0.945
VAMP3
Vesicle associated membrane protein 3.
    
 0.939
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.921
ENSAOCP00000027312
Vesicle-associated membrane protein 8 (endobrevin).
    
 0.895
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
   
 0.889
snap29
Synaptosome associated protein 29.
   
 0.879
vps51
VPS51 subunit of GARP complex.
    
 0.876
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.861
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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