Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
LOC111585839BAH domain-containing protein. (873 aa)    
Predicted Functional Partners:
mier3
Mesoderm induction early response 1, family member 3 b.
    
 
 0.780
mier1
Mesoderm induction early response 1b, transcriptional regulator.
    
 
 0.780
LOC111579445
PPP1R35_C domain-containing protein.
      
 0.684
pdxdc1
Pyridoxal-dependent decarboxylase domain containing 1.
      
 0.616
ccdc102a
Coiled-coil domain containing 102A.
      
 0.615
themis2
Thymocyte selection associated family member 2.
      
 0.591
tatdn2
TatD DNase domain containing 2.
   
  
 0.566
LOC111582671
Bromo adjacent homology domain containing 1.
  
  
 
0.564
pik3ip1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.552
TMEM43
Uncharacterized protein.
      
 0.548
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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