rogdi protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V1B2	DMXL1	ENSAOCP00000005384	ENSAOCP00000027474	ATPase H+ transporting V1 subunit B2.	Dmx like 1.	0.745
ATP6V1B2	ENSAOCP00000003747	ENSAOCP00000005384	ENSAOCP00000003747	ATPase H+ transporting V1 subunit B2.	ATPase H+ transporting V1 subunit E1a.	0.985
ATP6V1B2	LOC111581867	ENSAOCP00000005384	ENSAOCP00000024660	ATPase H+ transporting V1 subunit B2.	ATPase H+ transporting V1 subunit E1b.	0.985
ATP6V1B2	WDR7	ENSAOCP00000005384	ENSAOCP00000027599	ATPase H+ transporting V1 subunit B2.	WD repeat domain 7.	0.826
ATP6V1B2	atp6v1f	ENSAOCP00000005384	ENSAOCP00000031559	ATPase H+ transporting V1 subunit B2.	ATPase H+ transporting V1 subunit F.	0.993
ATP6V1B2	atp6v1h	ENSAOCP00000005384	ENSAOCP00000023022	ATPase H+ transporting V1 subunit B2.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.993
ATP6V1B2	dmxl2	ENSAOCP00000005384	ENSAOCP00000013106	ATPase H+ transporting V1 subunit B2.	Dmx-like 2.	0.745
ATP6V1B2	rogdi	ENSAOCP00000005384	ENSAOCP00000003640	ATPase H+ transporting V1 subunit B2.	Rogdi atypical leucine zipper.	0.829
ATP6V1B2	skp1	ENSAOCP00000005384	ENSAOCP00000018139	ATPase H+ transporting V1 subunit B2.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.676
DMXL1	ATP6V1B2	ENSAOCP00000027474	ENSAOCP00000005384	Dmx like 1.	ATPase H+ transporting V1 subunit B2.	0.745
DMXL1	ENSAOCP00000003747	ENSAOCP00000027474	ENSAOCP00000003747	Dmx like 1.	ATPase H+ transporting V1 subunit E1a.	0.746
DMXL1	LOC111581867	ENSAOCP00000027474	ENSAOCP00000024660	Dmx like 1.	ATPase H+ transporting V1 subunit E1b.	0.746
DMXL1	LOC111586455	ENSAOCP00000027474	ENSAOCP00000020502	Dmx like 1.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.745
DMXL1	WDR7	ENSAOCP00000027474	ENSAOCP00000027599	Dmx like 1.	WD repeat domain 7.	0.887
DMXL1	atp6v1f	ENSAOCP00000027474	ENSAOCP00000031559	Dmx like 1.	ATPase H+ transporting V1 subunit F.	0.783
DMXL1	atp6v1h	ENSAOCP00000027474	ENSAOCP00000023022	Dmx like 1.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.819
DMXL1	dmxl2	ENSAOCP00000027474	ENSAOCP00000013106	Dmx like 1.	Dmx-like 2.	0.902
DMXL1	rogdi	ENSAOCP00000027474	ENSAOCP00000003640	Dmx like 1.	Rogdi atypical leucine zipper.	0.943
DMXL1	skp1	ENSAOCP00000027474	ENSAOCP00000018139	Dmx like 1.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.837
ENSAOCP00000003747	ATP6V1B2	ENSAOCP00000003747	ENSAOCP00000005384	ATPase H+ transporting V1 subunit E1a.	ATPase H+ transporting V1 subunit B2.	0.985