Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111583199Forkhead box A3. (467 aa)    
Predicted Functional Partners:
klf12
Kruppel-like factor 12b.
    
 0.826
LOC111582985
Kruppel-like factor 17.
    
 0.799
gata6
GATA binding protein 6.
   
 0.754
LOC111573967
GATA binding protein 1a.
  
 0.690
hhex
Homeobox domain-containing protein.
   
 
 0.677
LOC111567737
Fatty acid binding protein 10a, liver basic.
      
 0.615
gata4
GATA binding protein 4.
   
 0.605
trps1
Trichorhinophalangeal syndrome I.
    
 0.602
myl7
Myosin, light chain 7, regulatory.
      
 0.592
hnf1a
HNF1 homeobox a.
     
 0.568
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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