Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bcl2l13BCL2 like 13. (605 aa)    
Predicted Functional Partners:
gabarapl2
GABA(A) receptor-associated protein like 2.
    
 0.940
gabarap
GABA(A) receptor-associated protein b.
    
 0.940
LOC111568400
Uncharacterized protein.
    
 0.916
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.916
LOC111563087
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.912
LOC111568932
Zgc:92606.
    
 0.911
LOC111587054
Microtubule-associated protein 1 light chain 3 gamma, like.
    
 0.911
ambra1
Autophagy/beclin-1 regulator 1b.
      
 0.705
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
      
 0.703
calcoco2
SKICH domain-containing protein.
      
 0.699
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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