LOC111563754 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ELAVL2	LOC111563754	ENSAOCP00000029275	ENSAOCP00000003769	ELAV-like protein; Belongs to the RRM elav family.	RNA binding motif protein 24a.	0.524
ELAVL2	LOC111571676	ENSAOCP00000029275	ENSAOCP00000014436	ELAV-like protein; Belongs to the RRM elav family.	RRM domain-containing protein.	0.601
ELAVL2	LOC111578995	ENSAOCP00000029275	ENSAOCP00000011172	ELAV-like protein; Belongs to the RRM elav family.	Transformer 2 alpha homolog.	0.571
ELAVL2	LOC111581799	ENSAOCP00000029275	ENSAOCP00000025874	ELAV-like protein; Belongs to the RRM elav family.	RNA binding fox-1 homolog 2.	0.492
ELAVL2	SRSF6	ENSAOCP00000029275	ENSAOCP00000014716	ELAV-like protein; Belongs to the RRM elav family.	RRM domain-containing protein.	0.442
ELAVL2	rbfox1	ENSAOCP00000029275	ENSAOCP00000022680	ELAV-like protein; Belongs to the RRM elav family.	RNA binding fox-1 homolog 1.	0.569
ENSAOCP00000031306	LOC111563754	ENSAOCP00000031306	ENSAOCP00000003769	ELAV like neuron-specific RNA binding protein 4.	RNA binding motif protein 24a.	0.528
ENSAOCP00000031306	LOC111568796	ENSAOCP00000031306	ENSAOCP00000011096	ELAV like neuron-specific RNA binding protein 4.	RRM domain-containing protein.	0.506
ENSAOCP00000031306	LOC111571676	ENSAOCP00000031306	ENSAOCP00000014436	ELAV like neuron-specific RNA binding protein 4.	RRM domain-containing protein.	0.613
ENSAOCP00000031306	LOC111578995	ENSAOCP00000031306	ENSAOCP00000011172	ELAV like neuron-specific RNA binding protein 4.	Transformer 2 alpha homolog.	0.579
ENSAOCP00000031306	LOC111581799	ENSAOCP00000031306	ENSAOCP00000025874	ELAV like neuron-specific RNA binding protein 4.	RNA binding fox-1 homolog 2.	0.512
ENSAOCP00000031306	SRSF6	ENSAOCP00000031306	ENSAOCP00000014716	ELAV like neuron-specific RNA binding protein 4.	RRM domain-containing protein.	0.493
ENSAOCP00000031306	rbfox1	ENSAOCP00000031306	ENSAOCP00000022680	ELAV like neuron-specific RNA binding protein 4.	RNA binding fox-1 homolog 1.	0.562
ENSAOCP00000031306	zcrb1	ENSAOCP00000031306	ENSAOCP00000011474	ELAV like neuron-specific RNA binding protein 4.	Zinc finger CCHC-type and RNA binding motif 1.	0.526
LOC111563754	ELAVL2	ENSAOCP00000003769	ENSAOCP00000029275	RNA binding motif protein 24a.	ELAV-like protein; Belongs to the RRM elav family.	0.524
LOC111563754	ENSAOCP00000031306	ENSAOCP00000003769	ENSAOCP00000031306	RNA binding motif protein 24a.	ELAV like neuron-specific RNA binding protein 4.	0.528
LOC111563754	LOC111564528	ENSAOCP00000003769	ENSAOCP00000018572	RNA binding motif protein 24a.	ELAV-like protein; Belongs to the RRM elav family.	0.522
LOC111563754	LOC111568796	ENSAOCP00000003769	ENSAOCP00000011096	RNA binding motif protein 24a.	RRM domain-containing protein.	0.628
LOC111563754	LOC111571676	ENSAOCP00000003769	ENSAOCP00000014436	RNA binding motif protein 24a.	RRM domain-containing protein.	0.469
LOC111563754	LOC111578995	ENSAOCP00000003769	ENSAOCP00000011172	RNA binding motif protein 24a.	Transformer 2 alpha homolog.	0.452